Transcript: ENST00000265245.5 LSG1-001

Description

large 60S subunit nuclear export GTPase 1 [Source:HGNC Symbol;Acc:25652]

Gene Synonyms

FLJ11301

Location

Chromosome 3: 194,361,517-194,393,206 reverse strand.

About this transcript

This transcript has 14 exons, is annotated with 14 domains and features, is associated with 15109 variant alleles and maps to 702 oligo probes.

Gene

This transcript is a product of gene ENSG00000041802.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000265245.5	LSG1-001	3572	658aa	ENSP00000265245.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33922	Q9H089	NM_018385.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000437613.1	LSG1-004	854	285aa	ENSP00000408264.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000427461.1	LSG1-003	755	178aa	ENSP00000400903.1	Nonsense mediated decay		F8WFC6	-	-
ENST00000480853.1	LSG1-002	539	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000466391.1	LSG1-006	791	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000460584.1	LSG1-007	668	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000475763.1	LSG1-008	590	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000461343.1	LSG1-005	428	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 3,572 bps, Translation length: 658 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9H089

CCDS

This transcript is a member of the Human CCDS set: CCDS33922

Version

ENST00000265245.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000342740 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000265245.5 LSG1-001

Summary