Transcript: ENST00000461115.1 IFT88-003

Description

intraflagellar transport 88 homolog (Chlamydomonas) [Source:HGNC Symbol;Acc:20606]

Gene Synonyms

D13S1056E, DAF19, MGC26259, TG737, TTC10, Tg737, hTg737

Location

Chromosome 13: 21,179,195-21,206,278 forward strand.

About this transcript

This transcript has 5 exons, is associated with 11566 variant alleles and maps to 117 oligo probes.

Gene

This transcript is a product of gene ENSG00000032742.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000319980.6	IFT88-002	3018	833aa	ENSP00000323580.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31944	F6SRW8 Q13099	NM_175605.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000382778.4	IFT88-201	3931	795aa	ENSP00000372228.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EW86 F6SRW8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000351808.5	IFT88-001	2856	824aa	ENSP00000261632.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31945	F6SRW8 Q13099	NM_006531.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537103.1	IFT88-202	2716	805aa	ENSP00000437719.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H6C2 F6SRW8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000389373.3	IFT88-007	575	50aa	ENSP00000374024.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F6SRW8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000461115.1	IFT88-003	1440	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482172.1	IFT88-005	968	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000460931.1	IFT88-004	700	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470695.1	IFT88-006	407	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 1,440 bps,

Version

ENST00000461115.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000044076 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000461115.1 IFT88-003

Summary