Transcript: ENST00000470999.1 CELSR3-004

Description

cadherin, EGF LAG seven-pass G-type receptor 3 [Source:HGNC Symbol;Acc:3230]

Gene Synonyms

CDHF11, EGFL1, FMI1, HFMI1, KIAA0812, MEGF2, RESDA1

Location

Chromosome 3: 48,677,917-48,679,570 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 829 variant alleles and maps to 92 oligo probes.

Gene

This transcript is a product of gene ENSG00000008300.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000164024.4	CELSR3-001	11956	3312aa	ENSP00000164024.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2775	B4DSQ9 Q9NYQ7	NM_001407.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544264.1	CELSR3-201	11971	3317aa	ENSP00000445694.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DSQ9 Q9NYQ7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000498057.1	CELSR3-003	5297	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000461362.1	CELSR3-002	3633	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000470999.1	CELSR3-004	564	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 564 bps,

Version

ENST00000470999.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000345127 (version 1)

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Transcript: ENST00000470999.1 CELSR3-004

Summary