Transcript: ENST00000164024.4 CELSR3-001

Description

cadherin, EGF LAG seven-pass G-type receptor 3 [Source:HGNC Symbol;Acc:3230]

Gene Synonyms

CDHF11, EGFL1, FMI1, HFMI1, KIAA0812, MEGF2, RESDA1

Location

About this transcript

This transcript has 35 exons, is annotated with 155 domains and features, is associated with 13678 variant alleles and maps to 1088 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000544264.1	CELSR3-201	11971	3317aa	ENSP00000445694.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DSQ9 Q9NYQ7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000164024.4	CELSR3-001	11956	3312aa	ENSP00000164024.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2775	B4DSQ9 Q9NYQ7	NM_001407.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000498057.1	CELSR3-003	5297	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000461362.1	CELSR3-002	3633	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000470999.1	CELSR3-004	564	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 35, Coding exons: 35, Transcript length: 11,956 bps, Translation length: 3,312 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NYQ7

CCDS

This transcript is a member of the Human CCDS set: CCDS2775

Version

ENST00000164024.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000257523 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.