Description
nucleoporin 88kDa [Source:HGNC Symbol;Acc:8067]
Gene Synonyms
MGC8530
Location
Chromosome 17: 5,264,258-5,323,480 reverse strand.
GRCh37:CM000679.1
About this gene
This gene has 13 transcripts (splice variants) and is associated with 1 phenotype.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000573584.1 | NUP88-001 | 2916 | 741aa | ENSP00000458954.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11070 | I3L245 Q99567 | NM_002532.4 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000225696.4 | NUP88-004 | 2194 | 696aa | ENSP00000225696.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DP20 I3L245 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000572809.1 | NUP88-006 | 771 | 153aa | ENSP00000459370.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L245 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000576708.1 | NUP88-010 | 800 | 110aa | ENSP00000461334.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000572290.1 | NUP88-005 | 615 | 128aa | ENSP00000459979.1 | Nonsense mediated decay | I3L2W3 | - | - | |
| ENST00000573169.1 | NUP88-014 | 1195 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000572019.1 | NUP88-009 | 580 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000574867.1 | NUP88-002 | 2081 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000576862.1 | NUP88-013 | 788 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000575976.1 | NUP88-008 | 599 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000574087.1 | NUP88-011 | 548 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000574855.1 | NUP88-012 | 434 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000570937.1 | NUP88-007 | 361 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
