Description
nucleoporin 85kDa [Source:HGNC Symbol;Acc:8734]
Gene Synonyms
FLJ12549, NUP75, Nup75, PCNT1
Location
Chromosome 17: 73,201,754-73,231,853 forward strand.
GRCh37:CM000679.1
About this gene
This gene has 27 transcripts (splice variants) and is associated with 2 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000447371.2 | NUP85-201 | 2233 | 462aa | ENSP00000408261.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DPW1 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000245544.4 | NUP85-001 | 2121 | 656aa | ENSP00000245544.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS32730 | B4DMQ3 F5H0W7 J3KSH3 J3QL54 Q9BW27 | NM_024844.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000579324.1 | NUP85-002 | 2010 | 544aa | ENSP00000463382.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H0W7 J3QL54 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000541827.1 | NUP85-202 | 2010 | 610aa | ENSP00000441762.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DMQ3 F5H0W7 J3QL54 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000540768.1 | NUP85-006 | 1926 | 259aa | ENSP00000445855.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H0W7 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000579298.1 | NUP85-004 | 1890 | 611aa | ENSP00000462749.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H0W7 J3KSH3 J3KT10 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000583070.1 | NUP85-016 | 907 | 302aa | ENSP00000463542.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000579557.1 | NUP85-025 | 817 | 272aa | ENSP00000463496.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3QLD4 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000583877.1 | NUP85-011 | 575 | 191aa | ENSP00000463715.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3QLV0 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000583569.1 | NUP85-008 | 553 | 120aa | ENSP00000462487.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3KSH3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000579900.1 | NUP85-024 | 528 | 114aa | ENSP00000463437.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3QL91 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000579838.1 | NUP85-023 | 373 | 98aa | ENSP00000462364.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000581104.1 | NUP85-005 | 2233 | 169aa | ENSP00000461919.1 | Nonsense mediated decay | J3KRC0 J3KSH3 | - | - | |
| ENST00000578830.1 | NUP85-012 | 922 | 100aa | ENSP00000462920.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000580879.1 | NUP85-018 | 583 | 19aa | ENSP00000463377.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000578987.1 | NUP85-021 | 388 | 46aa | ENSP00000464544.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000584155.1 | NUP85-022 | 300 | 18aa | ENSP00000464433.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000449421.2 | NUP85-003 | 1287 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000583948.1 | NUP85-015 | 1197 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000577208.1 | NUP85-010 | 572 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000581335.1 | NUP85-017 | 566 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000583548.1 | NUP85-009 | 562 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000582833.1 | NUP85-007 | 453 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000577645.1 | NUP85-014 | 869 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000582681.1 | NUP85-019 | 595 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000577561.1 | NUP85-013 | 524 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000578294.1 | NUP85-020 | 385 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
