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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PDCD1 ENSG00000188389

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Description

programmed cell death 1 [Source:HGNC Symbol;Acc:8760]

Gene Synonyms

CD279, PD-1, PD1, SLEB2, hPD-1, hPD-l

Location

Chromosome 2: 242,792,033-242,801,060 reverse strand.

GRCh37:CM000664.1

About this gene

This gene has 3 transcripts (splice variants) and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000334409.5	PDCD1-001	2114	288aa	ENSP00000335062.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33428	E7ER21 Q15116	NM_005018.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000343705.3	PDCD1-003	366	122aa	ENSP00000340808.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q86TL7	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000418831.1	PDCD1-002	1019	66aa	ENSP00000390296.1	Nonsense mediated decay		E7ER21	-	-

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Summary

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