Gene: CDH1 ENSG00000039068

Description

cadherin 1, type 1, E-cadherin (epithelial) [Source:HGNC Symbol;Acc:1748]

Gene Synonyms

Arc-1, CD324, CDHE, ECAD, LCAM, UVO, uvomorulin

Location

Chromosome 16: 68,771,128-68,869,451 forward strand.

GRCh37:CM000678.1

About this gene

This gene has 11 transcripts (splice variants), 13 paralogues and is associated with 95 phenotypes.

Transcripts

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Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261769.5	CDH1-001	4889	882aa	ENSP00000261769.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10869	B3GN61 P12830	NM_004360.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000422392.2	CDH1-004	2567	821aa	ENSP00000414946.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9UII8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000566612.1	CDH1-005	4138	537aa	ENSP00000454782.1	Nonsense mediated decay		H3BNC6	-	-
ENST00000566510.1	CDH1-006	2661	414aa	ENSP00000458139.1	Nonsense mediated decay		H3BVI7	-	-
ENST00000561751.1	CDH1-010	736	155aa	ENSP00000463170.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000562836.1	CDH1-002	2759	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000564676.1	CDH1-003	969	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000564745.1	CDH1-007	581	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000562118.1	CDH1-013	952	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000567320.1	CDH1-012	352	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000565810.1	CDH1-011	282	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Gene: CDH1 ENSG00000039068

Summary