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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CTSF ENSG00000174080

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Description

cathepsin F [Source:HGNC Symbol;Acc:2531]

Gene Synonyms

CATSF, CLN13

Location

Chromosome 11: 66,330,934-66,336,312 reverse strand.

GRCh37:CM000673.1

About this gene

This gene has 9 transcripts (splice variants), 9 paralogues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000310325.5	CTSF-001	2035	484aa	ENSP00000310832.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8144	E9PSC2 Q9UBX1	NM_003793.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000524994.1	CTSF-009	846	282aa	ENSP00000433082.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000526010.1	CTSF-003	548	120aa	ENSP00000435822.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PSC2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000525733.1	CTSF-008	609	82aa	ENSP00000434936.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000533168.1	CTSF-004	576	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000529561.1	CTSF-005	559	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000527141.1	CTSF-002	1856	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000529199.1	CTSF-006	578	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000530565.1	CTSF-007	555	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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