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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: COG1 ENSG00000166685

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Description

component of oligomeric golgi complex 1 [Source:HGNC Symbol;Acc:6545]

Gene Synonyms

CDG2G, KIAA1381, LDLB

Location

Chromosome 17: 71,189,129-71,204,646 forward strand.

GRCh37:CM000679.1

About this gene

This gene has 9 transcripts (splice variants) and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000438720.3	COG1-002	4051	962aa	ENSP00000400111.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KSY3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000299886.4	COG1-001	3079	980aa	ENSP00000299886.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11692	J3KSY3 Q8WTW3	NM_018714.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000582672.1	COG1-011	520	102aa	ENSP00000463298.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KSY3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000582512.1	COG1-010	506	126aa	ENSP00000463696.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KSY3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000582587.2	COG1-005	739	124aa	ENSP00000462101.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000582973.1	COG1-009	438	26aa	ENSP00000462709.1	Nonsense mediated decay		J3KSY3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000577238.1	COG1-007	707	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000580271.1	COG1-008	601	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000577844.1	COG1-006	580	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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