Description
cut-like homeobox 1 [Source:HGNC Symbol;Acc:2557]
Gene Synonyms
CASP, CDP, CDP/Cut, CDP/Cux, CDP1, COY1, CUT, CUTL1, CUX, Clox, Cux/CDP, GOLIM6, Nbla10317, RETfusion, p100, p110, p200, p75
Location
Chromosome 7: 101,458,959-101,927,249 forward strand.
GRCh37:CM000669.1
View alleles of this gene on alternative sequences
About this gene
This gene has 20 transcripts (splice variants), 1 gene allele, 4 paralogues and is associated with 104 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000360264.3 | CUX1-005 | 13762 | 1516aa | ENSP00000353401.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS56498 | P39880 | NM_001202543.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000292535.7 | CUX1-004 | 13747 | 1505aa | ENSP00000292535.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS5721 | P39880 | NM_181552.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000549414.2 | CUX1-006 | 4452 | 1483aa | ENSP00000446630.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | P39880 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000550008.2 | CUX1-007 | 4350 | 1449aa | ENSP00000447373.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | P39880 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000546411.2 | CUX1-008 | 4212 | 1403aa | ENSP00000450125.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | P39880 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000556210.1 | CUX1-009 | 4044 | 1347aa | ENSP00000451558.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | P39880 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000437600.4 | CUX1-003 | 3250 | 676aa | ENSP00000414091.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS47672 | Q13948 Q75MT4 | NM_181500.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000292538.4 | CUX1-001 | 2930 | 678aa | ENSP00000292538.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS5720 | Q13948 Q75MT4 | NM_001913.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000547394.2 | CUX1-002 | 2878 | 662aa | ENSP00000449371.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS56500 | Q13948 Q75MT4 | NM_001202544.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000425244.2 | CUX1-018 | 2776 | 632aa | ENSP00000409745.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS56499 | P39880 Q75MT4 | NM_001202545.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000393824.3 | CUX1-016 | 2331 | 639aa | ENSP00000377410.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS59071 | Q13948 Q75MT4 | NM_001202546.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000487284.1 | CUX1-010 | 1566 | 241aa | ENSP00000453648.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000560541.1 | CUX1-019 | 3492 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000558836.1 | CUX1-021 | 2965 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000606749.1 | CUX1-023 | 601 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000558469.1 | CUX1-020 | 588 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000465461.2 | CUX1-014 | 502 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000497815.1 | CUX1-012 | 947 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000485792.1 | CUX1-013 | 564 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000607092.1 | CUX1-022 | 559 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
