Description
collagen, type XI, alpha 2 [Source:HGNC Symbol;Acc:2187]
Gene Synonyms
DFNA13, DFNB53, FBCG2, HKE5, PARP, STL3
Location
Chromosome 6: 33,130,458-33,160,276 reverse strand.
GRCh37:CM000668.1
View alleles of this gene on alternative sequences
About this gene
This gene has 11 transcripts (splice variants), 1 gene allele, 17 paralogues and is associated with 19 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000374708.4 | COL11A2-001 | 6209 | 1650aa | ENSP00000363840.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS43452 | Q4VXY6 Q6LCP7 | NM_080681.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000341947.2 | COL11A2-201 | 6425 | 1736aa | ENSP00000339915.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A2AAS7 P13942 Q6LCP7 | NM_080680.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000357486.1 | COL11A2-202 | 6362 | 1715aa | ENSP00000350079.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YHM5 Q6LCP7 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000374714.1 | COL11A2-206 | 6347 | 1710aa | ENSP00000363846.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0Y3B5 Q6LCP7 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000374713.1 | COL11A2-205 | 6284 | 1689aa | ENSP00000363845.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YHM9 Q6LCP7 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000395197.1 | COL11A2-207 | 6245 | 1676aa | ENSP00000378623.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0Y3M9 Q6LCP7 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000374712.1 | COL11A2-204 | 6182 | 1655aa | ENSP00000363844.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0Y3B3 Q6LCP7 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000361917.1 | COL11A2-203 | 6104 | 1629aa | ENSP00000355123.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YIS1 Q6LCP7 | NM_080679.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000457788.1 | COL11A2-002 | 2099 | 624aa | ENSP00000405520.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A2AAS7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000395194.1 | COL11A2-003 | 1194 | 290aa | ENSP00000378620.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS54992 | J3JS72 P13942 | NM_001163771.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000477772.1 | COL11A2-004 | 1984 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - |
