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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ABAT ENSG00000183044

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Description

4-aminobutyrate aminotransferase [Source:HGNC Symbol;Acc:23]

Gene Synonyms

GABA-AT, GABAT, NPD009

Location

Chromosome 16: 8,768,422-8,878,432 forward strand.

GRCh37:CM000678.1

About this gene

This gene has 16 transcripts (splice variants) and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000396600.2	ABAT-201	5586	500aa	ENSP00000379845.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10534	H3BP74 H3BRJ1 P80404	NM_000663.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000268251.8	ABAT-001	4836	500aa	ENSP00000268251.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10534	H3BP74 H3BRJ1 P80404	NM_020686.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000567812.1	ABAT-003	1959	515aa	ENSP00000456330.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BP74 H3BRJ1 H3BRN4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000425191.2	ABAT-005	1923	500aa	ENSP00000411916.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10534	H3BP74 H3BRJ1 P80404	NM_001127448.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000569156.1	ABAT-006	1911	515aa	ENSP00000454963.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BNQ7 H3BP74 H3BRJ1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000561870.1	ABAT-013	592	65aa	ENSP00000456267.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BP74 H3BRJ1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000568847.1	ABAT-009	580	31aa	ENSP00000455184.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BP74	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000565016.1	ABAT-012	580	91aa	ENSP00000454415.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BMJ9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000564714.1	ABAT-008	466	95aa	ENSP00000456392.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BP74 H3BRJ1 H3BRT1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000566590.1	ABAT-002	2423	53aa	ENSP00000455198.1	Nonsense mediated decay		H3BP84	-	-
ENST00000562115.1	ABAT-011	634	117aa	ENSP00000455502.1	Nonsense mediated decay		H3BP74 H3BPW8 H3BRJ1	-	-
ENST00000563215.1	ABAT-004	1548	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000565671.1	ABAT-014	596	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000569695.1	ABAT-010	470	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000563992.1	ABAT-007	1870	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000564453.1	ABAT-015	572	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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