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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TPRN ENSG00000176058

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Description

taperin [Source:HGNC Symbol;Acc:26894]

Gene Synonyms

C9orf75, DFNB79, FLJ90254, RP11-350O14.7

Location

Chromosome 9: 140,086,069-140,098,645 reverse strand.

GRCh37:CM000671.1

About this gene

This gene has 5 transcripts (splice variants), 1 paralogue and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000409012.4	TPRN-001	2718	711aa	ENSP00000387100.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56594	Q4KMQ1 Q86WR5	NM_001128228.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000321773.2	TPRN-201	2532	678aa	ENSP00000313704.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BLU1 H7BXP5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000333046.4	TPRN-002	2109	537aa	ENSP00000327617.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BLU1	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000541945.1	TPRN-004	130	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477345.1	TPRN-003	3350	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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