Gene: PACS1 ENSG00000175115

Description

phosphofurin acidic cluster sorting protein 1 [Source:HGNC Symbol;Acc:30032]

Gene Synonyms

DKFZp434H1014, FLJ10209, KIAA1175, MRD17

Location

Chromosome 11: 65,837,834-66,012,218 forward strand.

GRCh37:CM000673.1

About this gene

This gene has 15 transcripts (splice variants), 1 paralogue and is associated with 3 phenotypes.

Transcripts

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Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000320580.4	PACS1-001	4392	963aa	ENSP00000316454.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8129	B4DF77 E9PNZ9 E9PSE1 E9PSG7 Q6VY07 Q9NTH2	NM_018026.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529757.1	PACS1-004	1688	499aa	ENSP00000432858.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DF77 E9PNZ9 E9PSE1 E9PSG7 Q9NTH2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000528935.1	PACS1-010	846	79aa	ENSP00000437052.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PNZ9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000529677.1	PACS1-015	679	107aa	ENSP00000432365.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000524815.1	PACS1-013	628	91aa	ENSP00000433991.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PSE1 E9PSG7 Q9NTH2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000531597.1	PACS1-014	617	76aa	ENSP00000434012.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PSE1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000533756.1	PACS1-017	578	106aa	ENSP00000437150.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PNG7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000527380.1	PACS1-016	548	166aa	ENSP00000432639.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PPK2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000531298.1	PACS1-007	547	118aa	ENSP00000437274.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000524784.1	PACS1-006	540	89aa	ENSP00000435037.1	Nonsense mediated decay		H0YE62	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000527224.1	PACS1-003	3024	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000534273.1	PACS1-009	612	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000525798.1	PACS1-012	589	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000533811.1	PACS1-008	541	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000529795.1	PACS1-011	448	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Gene: PACS1 ENSG00000175115

Summary