Description
ataxia telangiectasia and Rad3 related [Source:HGNC Symbol;Acc:882]
Gene Synonyms
FCTCS, FRP1, MEC1, SCKL, SCKL1
Location
Chromosome 3: 142,168,077-142,297,668 reverse strand.
GRCh37:CM000665.1
About this gene
This gene has 12 transcripts (splice variants), 1 paralogue and is associated with 127 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000350721.4 | ATR-001 | 8249 | 2644aa | ENSP00000343741.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS3124 | Q13535 | NM_001184.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000383101.3 | ATR-201 | 8056 | 2580aa | ENSP00000372581.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RIG7 Q13535 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000513291.1 | ATR-002 | 5190 | 457aa | ENSP00000424355.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000515149.2 | ATR-005 | 929 | 309aa | ENSP00000425897.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RIG7 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000507148.1 | ATR-003 | 724 | 100aa | ENSP00000426595.1 | Nonsense mediated decay | D6RFJ6 | - | - | |
| ENST00000504521.1 | ATR-013 | 718 | 80aa | ENSP00000422553.1 | Nonsense mediated decay | H0Y8Y6 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000515810.1 | ATR-014 | 553 | 39aa | ENSP00000421870.1 | Nonsense mediated decay | H0Y8R8 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000514393.1 | ATR-008 | 552 | 50aa | ENSP00000424754.1 | Nonsense mediated decay | H0Y9Q8 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000507620.1 | ATR-007 | 837 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000511016.1 | ATR-010 | 681 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000515863.1 | ATR-011 | 641 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000515107.1 | ATR-012 | 546 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
