Gene: SHH ENSG00000164690

Description

sonic hedgehog [Source:HGNC Symbol;Acc:10848]

Gene Synonyms

HHG1, HLP3, HPE3, MCOPCB5, SMMCI, TPT, TPTPS

Location

GRCh37:CM000669.1

About this gene

This gene has 5 transcripts (splice variants), 2 paralogues and is associated with 24 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000297261.2	SHH-001	4454	462aa	ENSP00000297261.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5942	D9ZGF9 Q15465	NM_000193.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000430104.1	SHH-003	677	169aa	ENSP00000396621.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JC48	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000441114.1	SHH-005	888	126aa	ENSP00000410546.1	Nonsense mediated decay		F8WB84	-	-
ENST00000435425.1	SHH-004	807	123aa	ENSP00000413871.1	Nonsense mediated decay		F8WEH4	-	-
ENST00000472308.1	SHH-002	504	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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