Description
scaffold attachment factor B [Source:HGNC Symbol;Acc:10520]
Gene Synonyms
HAP, HET, SAF-B1, SAFB1
Location
Chromosome 19: 5,623,046-5,668,489 forward strand.
GRCh37:CM000681.1
About this gene
This gene has 16 transcripts (splice variants) and 2 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000588852.1 | SAFB-002 | 2842 | 917aa | ENSP00000467423.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS59339 | F5GZU3 Q15424 Q68DW3 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000292123.5 | SAFB-003 | 3042 | 915aa | ENSP00000292123.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS12142 | Q15424 Q68DW3 | NM_002967.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000592224.1 | SAFB-001 | 3014 | 916aa | ENSP00000464840.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS59340 | Q15424 Q68DW3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000433404.1 | SAFB-201 | 2996 | 747aa | ENSP00000404545.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GZU3 Q68DW3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000454510.1 | SAFB-004 | 2650 | 848aa | ENSP00000415895.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS56077 | Q15424 Q68DW3 | NM_001201340.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000538656.1 | SAFB-202 | 2433 | 759aa | ENSP00000438880.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7Z2F6 Q68DW3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000589006.1 | SAFB-011 | 459 | 153aa | ENSP00000464758.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EII0 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000589863.1 | SAFB-005 | 2708 | 106aa | ENSP00000468543.1 | Nonsense mediated decay | K7ES42 | - | - | |
| ENST00000586934.1 | SAFB-006 | 995 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000591991.1 | SAFB-014 | 3471 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000592555.1 | SAFB-013 | 1360 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000592707.1 | SAFB-009 | 940 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000591666.1 | SAFB-008 | 632 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000592396.1 | SAFB-010 | 620 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000590485.1 | SAFB-007 | 548 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000586281.1 | SAFB-012 | 397 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
