Description
pogo transposable element with ZNF domain [Source:HGNC Symbol;Acc:18801]
Gene Synonyms
KIAA0461, SUHW5, ZNF280E, ZNF635, ZNF635m
Location
Chromosome 1: 151,375,200-151,431,941 reverse strand.
GRCh37:CM000663.1
About this gene
This gene has 23 transcripts (splice variants), 4 paralogues and is associated with 3 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000271715.2 | POGZ-001 | 6626 | 1410aa | ENSP00000271715.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS997 | E9PIR8 E9PJY9 F5H8H4 Q7Z3K3 | NM_015100.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000361398.3 | POGZ-201 | 6458 | 1357aa | ENSP00000354467.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS998 | A6PW30 F5H8H4 Q7Z3K3 | NM_001194938.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000392723.1 | POGZ-002 | 6152 | 1357aa | ENSP00000376484.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS998 | A6PW30 F5H8H4 Q7Z3K3 | NM_207171.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000368863.2 | POGZ-003 | 6054 | 1315aa | ENSP00000357856.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44222 | F5H8H4 Q7Z3K3 | NM_145796.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000409503.1 | POGZ-016 | 4813 | 1401aa | ENSP00000386836.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS53366 | E9PIR8 E9PJY9 F5H8H4 Q7Z3K3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000531094.1 | POGZ-017 | 4415 | 1348aa | ENSP00000431259.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS53365 | A6PW30 F5H8H4 Q7Z3K3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000491586.1 | POGZ-011 | 4130 | 1366aa | ENSP00000418408.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A6PW30 F5H8H4 Q7Z3K3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000540984.1 | POGZ-202 | 3112 | 772aa | ENSP00000443547.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H8H4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000529669.1 | POGZ-020 | 949 | 316aa | ENSP00000432295.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YCT3 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000533351.1 | POGZ-019 | 586 | 139aa | ENSP00000433637.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PJY9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000594456.1 | POGZ-021 | 561 | 109aa | ENSP00000472860.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000533461.1 | POGZ-018 | 550 | 151aa | ENSP00000433934.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PIR8 E9PJY9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000450842.1 | POGZ-010 | 489 | 84aa | ENSP00000395332.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A6PW30 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000439756.1 | POGZ-009 | 199 | 8aa | ENSP00000390156.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000441516.1 | POGZ-007 | 526 | 60aa | ENSP00000403955.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000358476.3 | POGZ-004 | 6459 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000485040.1 | POGZ-005 | 2741 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000467287.1 | POGZ-012 | 649 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000495253.1 | POGZ-008 | 617 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000482678.1 | POGZ-014 | 568 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000492528.1 | POGZ-015 | 508 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000497787.1 | POGZ-006 | 490 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000476128.1 | POGZ-013 | 397 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
