Description
NLR family, CARD domain containing 5 [Source:HGNC Symbol;Acc:29933]
Gene Synonyms
CLR16.1, FLJ21709, NOD27, NOD4
Location
Chromosome 16: 57,023,397-57,117,443 forward strand.
GRCh37:CM000678.1
About this gene
This gene has 30 transcripts (splice variants) and 6 paralogues.
Transcripts
Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|---|
ENST00000262510.6 | NLRC5-001 | 6822 | 1866aa | ENSP00000262510.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS10773 | F5GYP0 F5H274 Q86WI3 | NM_032206.4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
ENST00000436936.1 | NLRC5-202 | 6886 | 1551aa | ENSP00000389739.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GYP0 F5H274 H0YGT6 Q86WI3 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
ENST00000308149.7 | NLRC5-201 | 6735 | 1837aa | ENSP00000308886.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GYP0 F5H274 Q86WI3 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
ENST00000539144.1 | NLRC5-013 | 6505 | 1837aa | ENSP00000441727.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GYP0 F5H274 Q86WI3 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
ENST00000538805.1 | NLRC5-004 | 3552 | 1180aa | ENSP00000442906.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
ENST00000538110.1 | NLRC5-006 | 2656 | 885aa | ENSP00000441597.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YG32 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
ENST00000543030.1 | NLRC5-008 | 1894 | 631aa | ENSP00000440153.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YFT1 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
ENST00000544641.1 | NLRC5-015 | 594 | 74aa | ENSP00000439464.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GYP0 F5H274 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000399221.3 | NLRC5-026 | 550 | 157aa | ENSP00000440184.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
ENST00000538059.1 | NLRC5-016 | 282 | 19aa | ENSP00000441311.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GYP0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000545081.1 | NLRC5-007 | 5832 | 1057aa | ENSP00000443825.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
ENST00000539881.1 | NLRC5-003 | 4777 | 720aa | ENSP00000441679.1 | Nonsense mediated decay | F5GYP0 F5H274 Q86WI3 | - | - | |
ENST00000538453.1 | NLRC5-009 | 4121 | 702aa | ENSP00000444773.1 | Nonsense mediated decay | H0YGT6 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
ENST00000540182.1 | NLRC5-010 | 3617 | 387aa | ENSP00000438548.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
ENST00000537056.1 | NLRC5-012 | 3430 | 325aa | ENSP00000437583.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
ENST00000545349.1 | NLRC5-028 | 485 | 110aa | ENSP00000444960.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
ENST00000543141.1 | NLRC5-018 | 563 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000535658.1 | NLRC5-017 | 527 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000543103.1 | NLRC5-014 | 1896 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000538930.1 | NLRC5-011 | 1686 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000534927.1 | NLRC5-029 | 1051 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000538778.1 | NLRC5-021 | 1019 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000535284.1 | NLRC5-024 | 907 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000536231.1 | NLRC5-020 | 868 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000543402.1 | NLRC5-025 | 575 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000538273.1 | NLRC5-019 | 560 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000534931.1 | NLRC5-023 | 549 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000544189.1 | NLRC5-027 | 546 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000543049.1 | NLRC5-030 | 484 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000541020.1 | NLRC5-022 | 465 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |