Description
serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 [Source:HGNC Symbol;Acc:8824]
Gene Synonyms
EPC-1, OI12, OI6, PEDF, PIG35
Location
Chromosome 17: 1,665,253-1,680,868 forward strand.
GRCh37:CM000679.1
About this gene
This gene has 12 transcripts (splice variants), 13 paralogues and is associated with 3 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000254722.4 | SERPINF1-001 | 1548 | 418aa | ENSP00000254722.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11012 | I3L107 I3L2R7 I3L3Z3 I3L425 I3L4F9 P36955 | NM_002615.5 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000576406.1 | SERPINF1-009 | 795 | 90aa | ENSP00000461214.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L4F9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000577053.1 | SERPINF1-004 | 731 | 111aa | ENSP00000460842.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L3Z3 I3L425 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000573763.1 | SERPINF1-012 | 729 | 138aa | ENSP00000461405.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L4N7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000572048.1 | SERPINF1-013 | 573 | 99aa | ENSP00000458484.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L107 I3L4F9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000571360.1 | SERPINF1-010 | 478 | 128aa | ENSP00000461660.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L4Z0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000570731.1 | SERPINF1-003 | 459 | 132aa | ENSP00000459869.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L2R7 I3L3Z3 I3L425 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000571149.1 | SERPINF1-011 | 431 | 87aa | ENSP00000460905.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L425 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000573770.1 | SERPINF1-006 | 789 | 114aa | ENSP00000459107.1 | Nonsense mediated decay | I3L1U4 I3L425 | - | - | |
| ENST00000571870.1 | SERPINF1-005 | 739 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000570820.1 | SERPINF1-008 | 820 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000572517.1 | SERPINF1-007 | 672 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
