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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: FOXA2 ENSG00000125798

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Description

forkhead box A2 [Source:HGNC Symbol;Acc:5022]

Gene Synonyms

HNF3B, TCF3B

Location

Chromosome 20: 22,561,643-22,566,093 reverse strand.

GRCh37:CM000682.1

About this gene

This gene has 2 transcripts (splice variants), 23 paralogues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000419308.2	FOXA2-002	2422	463aa	ENSP00000400341.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46585	B0ZTD4 Q9Y261	NM_021784.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000377115.4	FOXA2-001	2401	457aa	ENSP00000366319.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13147	Q9Y261	NM_153675.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

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Summary

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