Description
SMEK homolog 1, suppressor of mek1 (Dictyostelium) [Source:HGNC Symbol;Acc:20219]
Gene Synonyms
FLFL1, FLJ20707, KIAA2010, MSTP033, PP4R3A, PPP4R3A, smk-1, smk1
Location
Chromosome 14: 91,923,955-91,976,898 reverse strand.
GRCh37:CM000676.1
About this gene
This gene has 14 transcripts (splice variants) and 1 paralogue.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000554684.1 | SMEK1-001 | 4108 | 820aa | ENSP00000450864.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS9895 | G3V231 G3V4R3 G3V5Z3 Q6IN85 | NM_001284280.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000337238.4 | SMEK1-201 | 3894 | 820aa | ENSP00000337125.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS9895 | G3V231 G3V4R3 G3V5Z3 Q6IN85 | NM_032560.4 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000554943.1 | SMEK1-007 | 3369 | 833aa | ENSP00000450883.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V231 G3V4R3 Q6IN85 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000555462.1 | SMEK1-003 | 3236 | 594aa | ENSP00000450891.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS61532 | G3V5A2 Q6IN85 | NM_001284281.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000428424.2 | SMEK1-202 | 3216 | 594aa | ENSP00000392704.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS61532 | G3V5A2 Q6IN85 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000555470.1 | SMEK1-012 | 595 | 199aa | ENSP00000451841.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000554511.1 | SMEK1-010 | 580 | 99aa | ENSP00000451939.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V4R3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000555029.1 | SMEK1-011 | 571 | 190aa | ENSP00000452257.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V5A2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000557018.1 | SMEK1-009 | 534 | 150aa | ENSP00000450432.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V231 G3V4R3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000554390.1 | SMEK1-002 | 2953 | 706aa | ENSP00000452596.1 | Non stop decay | G3V231 G3V4R3 G3V5Z3 | - | - | |
| ENST00000554308.1 | SMEK1-005 | 2515 | 543aa | ENSP00000450473.1 | Nonsense mediated decay | G3V231 G3V4R3 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000555718.1 | SMEK1-013 | 819 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000554574.1 | SMEK1-008 | 1944 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000557382.1 | SMEK1-014 | 844 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
