Description
RNA binding protein, fox-1 homolog (C. elegans) 1 [Source:HGNC Symbol;Acc:18222]
Gene Synonyms
2BP1, A2BP, A2BP1, FOX-1, FOX1, HRNBP1
Location
Chromosome 16: 6,069,095-7,763,340 forward strand.
GRCh37:CM000678.1
About this gene
This gene has 20 transcripts (splice variants), 2 paralogues and is associated with 2 phenotypes.
Transcripts
Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|---|
ENST00000340209.4 | RBFOX1-201 | 4099 | 402aa | ENSP00000344196.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | J3KNW3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000547372.1 | RBFOX1-010 | 3524 | 466aa | ENSP00000446842.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VZG9 F8VZY7 Q59HD3 Q8TCM0 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000355637.4 | RBFOX1-002 | 3321 | 395aa | ENSP00000347855.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS10532 | Q9NWB1 | NM_145893.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000311745.5 | RBFOX1-001 | 3268 | 418aa | ENSP00000309117.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS10531 | Q9NWB1 | NM_145892.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000550418.1 | RBFOX1-003 | 2277 | 397aa | ENSP00000450031.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55983 | F8VZY7 Q8TCM0 Q9NWB1 | NM_018723.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000553186.1 | RBFOX1-004 | 2196 | 370aa | ENSP00000447753.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55984 | Q9NWB1 | NM_001142333.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000547605.1 | RBFOX1-014 | 1811 | 262aa | ENSP00000450402.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VR27 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000422070.4 | RBFOX1-009 | 1684 | 425aa | ENSP00000391269.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7Z1U7 F8VZY7 Q59HD3 Q8TCM0 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000535565.2 | RBFOX1-005 | 1599 | 380aa | ENSP00000438768.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H0M1 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000436368.2 | RBFOX1-011 | 1530 | 392aa | ENSP00000402745.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS45405 | Q9NWB1 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000547338.1 | RBFOX1-008 | 1513 | 397aa | ENSP00000447717.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55983 | F8VZY7 Q8TCM0 Q9NWB1 | NM_001142334.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000552089.1 | RBFOX1-006 | 1430 | 391aa | ENSP00000448496.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VRS4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000551752.1 | RBFOX1-007 | 974 | 263aa | ENSP00000447281.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VZY7 Q8TCM0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000570626.1 | RBFOX1-019 | 725 | 189aa | ENSP00000458748.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L1D4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000567470.1 | RBFOX1-018 | 420 | 74aa | ENSP00000454250.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
ENST00000547427.1 | RBFOX1-012 | 557 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000548749.1 | RBFOX1-013 | 538 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000569889.1 | RBFOX1-017 | 503 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000570188.1 | RBFOX1-016 | 568 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000564850.1 | RBFOX1-015 | 293 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |