Description
phosphatidylinositol binding clathrin assembly protein [Source:HGNC Symbol;Acc:15514]
Gene Synonyms
CALM, CLTH, LAP
Location
Chromosome 11: 85,668,727-85,780,924 reverse strand.
GRCh37:CM000673.1
About this gene
This gene has 23 transcripts (splice variants), 1 paralogue and is associated with 62 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000526033.1 | PICALM-001 | 3613 | 645aa | ENSP00000433846.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55784 | E9PI56 E9PKP6 E9PLJ8 Q13492 | NM_007166.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000532317.1 | PICALM-002 | 3474 | 610aa | ENSP00000436958.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS31653 | E9PI56 E9PKP6 E9PLJ8 Q13492 | NM_001008660.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000393346.3 | PICALM-005 | 2340 | 652aa | ENSP00000377015.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8272 | E9PI56 E9PKP6 E9PLJ8 Q13492 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000528398.1 | PICALM-003 | 2049 | 551aa | ENSP00000434884.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55783 | E9PI56 Q13492 | NM_001206947.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000356360.5 | PICALM-006 | 1958 | 632aa | ENSP00000348718.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PI56 E9PKP6 E9PLJ8 Q13492 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000529760.1 | PICALM-018 | 1153 | 308aa | ENSP00000435807.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DLM1 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000530692.1 | PICALM-021 | 963 | 215aa | ENSP00000436852.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000530542.1 | PICALM-017 | 905 | 302aa | ENSP00000435737.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000526961.1 | PICALM-019 | 802 | 264aa | ENSP00000432976.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000529016.1 | PICALM-023 | 757 | 244aa | ENSP00000432509.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000531930.1 | PICALM-007 | 703 | 185aa | ENSP00000433303.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PI56 E9PKP6 E9PLJ8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000532603.1 | PICALM-020 | 566 | 134aa | ENSP00000435311.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000528256.1 | PICALM-010 | 563 | 148aa | ENSP00000431545.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PKP6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000525162.1 | PICALM-008 | 548 | 147aa | ENSP00000436508.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PI56 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000534412.1 | PICALM-013 | 811 | 48aa | ENSP00000435499.1 | Nonsense mediated decay | E9PJT1 | - | - | |
| ENST00000532041.1 | PICALM-011 | 699 | 105aa | ENSP00000431728.1 | Nonsense mediated decay | E9PK13 | - | - | |
| ENST00000531558.1 | PICALM-012 | 565 | 48aa | ENSP00000433166.1 | Nonsense mediated decay | E9PJT1 | - | - | |
| ENST00000528411.1 | PICALM-009 | 586 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000526548.1 | PICALM-022 | 738 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000526907.1 | PICALM-024 | 737 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000531771.1 | PICALM-014 | 631 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000533350.1 | PICALM-015 | 541 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000534375.1 | PICALM-016 | 390 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
