Description
transcription factor 3 [Source:HGNC Symbol;Acc:11633]
Gene Synonyms
BHLHB21, E2A, E47, ITF1, MGC129647, MGC129648, TCF-3, VDIR, bHLHb21
Location
Chromosome 19: 1,609,291-1,652,604 reverse strand.
GRCh37:CM000681.1
About this gene
This gene has 18 transcripts (splice variants), 2 paralogues and is associated with 84 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000262965.5 | TCF3-001 | 4723 | 654aa | ENSP00000262965.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS12074 | B1NYC3 K7EKB9 K7ENI0 K7EPS2 P15923 Q6PJU3 | NM_003200.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000344749.5 | TCF3-201 | 4436 | 651aa | ENSP00000344375.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS45899 | B1NYC3 K7ENI0 P15923 | NM_001136139.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000453954.2 | TCF3-005 | 2699 | 566aa | ENSP00000396363.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B1NYC3 K7EMM4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000588136.1 | TCF3-002 | 2577 | 651aa | ENSP00000468487.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS45899 | B1NYC3 K7ENI0 P15923 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000395423.3 | TCF3-003 | 2463 | 658aa | ENSP00000378813.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B1NYC3 Q2TB39 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000585731.1 | TCF3-004 | 1076 | 141aa | ENSP00000465510.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | P15923 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000593064.1 | TCF3-014 | 1020 | 204aa | ENSP00000468481.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EKB9 K7EPS2 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000587235.1 | TCF3-008 | 970 | 213aa | ENSP00000466052.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7ELF3 K7ENI0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000592628.1 | TCF3-016 | 853 | 179aa | ENSP00000465549.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EKB9 K7EPS2 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000590684.1 | TCF3-019 | 677 | 159aa | ENSP00000466565.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EMM4 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000586318.1 | TCF3-007 | 631 | 95aa | ENSP00000466954.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7ENI0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000587425.1 | TCF3-013 | 623 | 163aa | ENSP00000467508.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EPS2 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000590436.1 | TCF3-006 | 338 | 113aa | ENSP00000466952.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000586410.1 | TCF3-010 | 279 | 93aa | ENSP00000467388.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000592395.1 | TCF3-012 | 995 | 51aa | ENSP00000465251.1 | Nonsense mediated decay | K7EJN4 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000585855.1 | TCF3-018 | 678 | 82aa | ENSP00000465481.1 | Nonsense mediated decay | K7EK65 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000586164.1 | TCF3-011 | 409 | 51aa | ENSP00000467972.1 | Nonsense mediated decay | K7EJN4 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000590605.1 | TCF3-009 | 471 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
