Description
vacuole membrane protein 1 [Source:HGNC Symbol;Acc:29559]
Gene Synonyms
EPG3, MIRN21, TANGO5, TDC1, TMEM49, hsa-mir-21, miR-21, miRNA21
Location
Chromosome 17: 57,784,553-57,919,616 forward strand.
GRCh37:CM000679.1
About this gene
This gene has 21 transcripts (splice variants).
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000262291.4 | VMP1-001 | 2712 | 406aa | ENSP00000262291.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11619 | B4DVV9 D3DU01 K7EK01 K7EM96 K7EMI0 K7ENU2 Q96GC9 | NM_030938.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000539763.1 | VMP1-203 | 1430 | 214aa | ENSP00000439959.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DVV9 K7EM96 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000537567.1 | VMP1-202 | 1406 | 272aa | ENSP00000445130.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DED7 B4DVV9 K7EM96 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000545362.1 | VMP1-204 | 1358 | 350aa | ENSP00000446230.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H2J3 K7EK01 K7EMI0 K7ENU2 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000536180.1 | VMP1-201 | 1332 | 309aa | ENSP00000444969.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DGZ7 B4DVV9 K7EM96 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000591315.1 | VMP1-003 | 800 | 138aa | ENSP00000466511.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EK01 K7EMI0 K7ENU2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000591877.1 | VMP1-014 | 791 | 225aa | ENSP00000467350.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EPE7 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000587259.1 | VMP1-007 | 606 | 92aa | ENSP00000465397.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EK01 K7ENU2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000587945.1 | VMP1-008 | 583 | 44aa | ENSP00000466413.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EM96 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000589823.2 | VMP1-017 | 580 | 167aa | ENSP00000466198.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EK01 K7ELS2 K7EMI0 K7ENU2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000592106.1 | VMP1-006 | 341 | 78aa | ENSP00000467093.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7ENU2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000592619.1 | VMP1-015 | 838 | 58aa | ENSP00000465911.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000593168.1 | VMP1-010 | 558 | 74aa | ENSP00000465972.1 | Nonsense mediated decay | K7EL93 | - | - | |
| ENST00000585847.1 | VMP1-009 | 545 | 75aa | ENSP00000465947.1 | Nonsense mediated decay | K7EL74 | - | - | |
| ENST00000586245.1 | VMP1-011 | 544 | 44aa | ENSP00000466579.1 | Nonsense mediated decay | K7EMN6 | - | - | |
| ENST00000588617.1 | VMP1-013 | 884 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000591782.1 | VMP1-016 | 729 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000588915.1 | VMP1-002 | 231 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000592790.1 | VMP1-004 | 4325 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000587470.1 | VMP1-012 | 995 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000588131.1 | VMP1-005 | 587 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
