Description
jade family PHD finger 2 [Source:HGNC Symbol;Acc:22984]
Gene Synonyms
JADE-2, KIAA0239, PHF15
Location
Chromosome 5: 133,860,003-133,918,918 forward strand.
GRCh37:CM000667.1
About this gene
This gene has 10 transcripts (splice variants) and 8 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000395003.1 | JADE2-002 | 6463 | 790aa | ENSP00000378451.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS4176 | C9J929 D6R9B8 Q9NQC1 | NM_015288.4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000361895.2 | JADE2-001 | 3212 | 791aa | ENSP00000354425.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J929 D3DQA3 D6R9B8 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000402835.1 | JADE2-007 | 2797 | 509aa | ENSP00000384671.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B5MBX1 C9J929 D6R9B8 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000282605.4 | JADE2-003 | 2748 | 834aa | ENSP00000282605.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B3KPL2 C9J929 D6R9B8 G3XAA4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000431355.1 | JADE2-008 | 887 | 255aa | ENSP00000406189.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J929 D6R9B8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000512386.1 | JADE2-011 | 567 | 149aa | ENSP00000422991.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6R9B8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000430087.1 | JADE2-006 | 1256 | 47aa | ENSP00000396026.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000515554.1 | JADE2-010 | 549 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000453515.1 | JADE2-009 | 548 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000470876.1 | JADE2-004 | 2997 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
