Description
coiled-coil domain containing 88C [Source:HGNC Symbol;Acc:19967]
Gene Synonyms
DAPLE, HKRP2, HkRP2, KIAA1509
Location
Chromosome 14: 91,737,667-91,884,188 reverse strand.
GRCh37:CM000676.1
About this gene
This gene has 14 transcripts (splice variants), 5 paralogues and is associated with 4 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000389857.6 | CCDC88C-001 | 7474 | 2028aa | ENSP00000374507.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS45151 | B4DZB8 Q9P219 | NM_001080414.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000331194.7 | CCDC88C-201 | 1920 | 552aa | ENSP00000330332.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9P219 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000553403.1 | CCDC88C-002 | 1651 | 96aa | ENSP00000451392.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V3S0 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000389856.5 | CCDC88C-003 | 1641 | 88aa | ENSP00000374506.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q0P665 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000556726.1 | CCDC88C-005 | 3617 | 131aa | ENSP00000452406.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000554165.1 | CCDC88C-007 | 420 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000554872.1 | CCDC88C-004 | 1165 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000334448.5 | CCDC88C-006 | 1055 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000557455.1 | CCDC88C-011 | 811 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000555995.1 | CCDC88C-010 | 689 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000556767.1 | CCDC88C-008 | 676 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000553437.1 | CCDC88C-009 | 550 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000554051.1 | CCDC88C-013 | 478 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000557507.1 | CCDC88C-012 | 429 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
