Description
vacuolar protein sorting 41 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:12713]
Gene Synonyms
HVPS41, HVSP41, hVps41p
Location
Chromosome 7: 38,762,563-38,971,994 reverse strand.
GRCh37:CM000669.1
About this gene
This gene has 14 transcripts (splice variants) and is associated with 1 phenotype.
Transcripts
Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|---|
ENST00000310301.4 | VPS41-001 | 5903 | 854aa | ENSP00000309457.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS5457 | C9J2U9 P49754 Q75MS2 | NM_014396.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000395969.2 | VPS41-002 | 3181 | 829aa | ENSP00000379297.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS5458 | E9PF36 Q75MS1 Q9H348 | NM_080631.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000413141.1 | VPS41-012 | 575 | 156aa | ENSP00000412974.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JU58 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000414632.1 | VPS41-003 | 548 | 177aa | ENSP00000411919.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J2U9 C9J3F8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000418457.2 | VPS41-014 | 532 | 104aa | ENSP00000407835.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J2U9 C9JZ11 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000457055.1 | VPS41-013 | 465 | 73aa | ENSP00000398584.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J2U9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000439468.1 | VPS41-006 | 354 | 109aa | ENSP00000395410.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H7C0K2 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
ENST00000265745.9 | VPS41-010 | 769 | 209aa | ENSP00000265745.9 | Nonsense mediated decay | C9J2U9 H7BXH3 Q75MS2 | - | - | |
ENST00000448833.1 | VPS41-004 | 711 | 150aa | ENSP00000391980.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
ENST00000466017.1 | VPS41-011 | 591 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000485955.1 | VPS41-009 | 571 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000482217.1 | VPS41-007 | 951 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000490924.1 | VPS41-005 | 496 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000462429.1 | VPS41-008 | 347 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |