Gene: CAPN5 ENSG00000262875

Description

calpain 5 [Source:HGNC Symbol;Acc:1482]

Gene Synonyms

HTRA3, NCL3, nCL-3

Location

Chromosome HG414_PATCH: 76,777,976-76,835,592 forward strand.

GRCh37:JH159143.1

View this gene on the primary assembly.

About this gene

This gene has 7 transcripts (splice variants), 1 gene allele and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq	Flags
ENST00000574625.1	CAPN5-004	2805	680aa	ENSP00000461226.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7EV01	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000571230.2	CAPN5-001	2791	640aa	ENSP00000461719.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9PS73 O15484	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000576267.1	CAPN5-003	2333	640aa	ENSP00000458516.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9PS73 O15484	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000572720.1	CAPN5-002	597	97aa	ENSP00000460508.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9PS73	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000572669.1	CAPN5-005	534	52aa	ENSP00000466815.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K7EP62	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000572522.1	CAPN5-008	2564	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000570643.1	CAPN5-007	542	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

EMBL-EBI User Survey 2024

Gene: CAPN5 ENSG00000262875

Summary

EMBL-EBI User Survey 2024

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Gene: CAPN5 ENSG00000262875

Summary