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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: C14orf39 ENSG00000179008

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Description

chromosome 14 open reading frame 39 [Source:HGNC Symbol;Acc:19849]

Gene Synonyms

SIX6OS1, Six6os1

Location

Chromosome 14: 60,863,187-60,982,261 reverse strand.

GRCh37:CM000676.1

About this gene

This gene has 5 transcripts (splice variants) and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000321731.3	C14orf39-001	2813	587aa	ENSP00000324920.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9746	G3V3U9 G3V493 Q8N1H7	NM_174978.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000556799.1	C14orf39-005	558	88aa	ENSP00000451441.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V3U9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000555476.1	C14orf39-004	482	114aa	ENSP00000451665.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V493	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000557138.1	C14orf39-003	1497	37aa	ENSP00000450476.1	Nonsense mediated decay		G3V257	-	-
ENST00000498565.1	C14orf39-002	475	72aa	ENSP00000451937.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

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Summary

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