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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SIX5 ENSG00000177045

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Description

SIX homeobox 5 [Source:HGNC Symbol;Acc:10891]

Gene Synonyms

BOR2, DMAHP

Location

Chromosome 19: 46,268,043-46,272,484 reverse strand.

GRCh37:CM000681.1

About this gene

This gene has 3 transcripts (splice variants), 5 paralogues and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000317578.6	SIX5-001	3318	739aa	ENSP00000316842.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12673	Q8N196	NM_175875.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560168.1	SIX5-004	1975	69aa	ENSP00000453189.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YLF6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560160.1	SIX5-003	1809	255aa	ENSP00000453239.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

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Summary

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