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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LYSMD3 ENSG00000176018

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Description

LysM, putative peptidoglycan-binding, domain containing 3 [Source:HGNC Symbol;Acc:26969]

Gene Synonyms

FLJ13542

Location

Chromosome 5: 89,811,428-89,825,401 reverse strand.

GRCh37:CM000667.1

About this gene

This gene has 4 transcripts (splice variants) and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000315948.6	LYSMD3-002	4259	306aa	ENSP00000314518.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43338	A8K613 Q7Z3D4	NM_198273.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000500869.2	LYSMD3-003	3863	150aa	ENSP00000427020.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q7Z3D4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000509384.1	LYSMD3-001	1538	127aa	ENSP00000427683.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS68911	Q7Z3D4	NM_001286812.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000453259.2	LYSMD3-004	553	90aa	ENSP00000405507.2	Nonsense mediated decay		G5E9N8	-	-

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Summary

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