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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LGI3 ENSG00000168481

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Description

leucine-rich repeat LGI family, member 3 [Source:HGNC Symbol;Acc:18711]

Gene Synonyms

LGIL4

Location

Chromosome 8: 22,004,338-22,014,597 reverse strand.

GRCh37:CM000670.1

About this gene

This gene has 5 transcripts (splice variants) and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000306317.2	LGI3-001	3272	548aa	ENSP00000302297.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6025	Q8N145	NM_139278.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000424267.2	LGI3-002	3114	524aa	ENSP00000399121.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A5PLP2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000517694.1	LGI3-004	663	221aa	ENSP00000427817.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YAP4	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000518365.1	LGI3-005	784	134aa	ENSP00000430653.1	Nonsense mediated decay		E5RIV5	-	-
ENST00000520124.1	LGI3-003	4420	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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