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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SLC38A8 ENSG00000166558

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Description

solute carrier family 38, member 8 [Source:HGNC Symbol;Acc:32434]

Location

Chromosome 16: 84,043,272-84,076,241 reverse strand.

GRCh37:CM000678.1

About this gene

This gene has 4 transcripts (splice variants), 1 paralogue and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000299709.3	SLC38A8-001	1308	435aa	ENSP00000299709.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32495	A6NNN8 H3BP02 H3BUP5	NM_001080442.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000568178.1	SLC38A8-002	861	262aa	ENSP00000457737.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BP02 H3BUP5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000569816.1	SLC38A8-003	578	46aa	ENSP00000455085.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BP02	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000568003.1	SLC38A8-004	501	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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