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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CLDN1 ENSG00000163347

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Description

claudin 1 [Source:HGNC Symbol;Acc:2032]

Gene Synonyms

CLD1, ILVASC, SEMP1

Location

Chromosome 3: 190,023,490-190,040,264 reverse strand.

GRCh37:CM000665.1

About this gene

This gene has 2 transcripts (splice variants), 12 paralogues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000295522.3	CLDN1-001	3481	211aa	ENSP00000295522.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3295	A5JSJ9 B4DLC3 O95832	NM_021101.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000490800.1	CLDN1-004	432	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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