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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: S100A1 ENSG00000160678

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Description

S100 calcium binding protein A1 [Source:HGNC Symbol;Acc:10486]

Gene Synonyms

S100, S100-alpha, S100A

Location

Chromosome 1: 153,600,402-153,604,513 forward strand.

GRCh37:CM000663.1

About this gene

This gene has 5 transcripts (splice variants) and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000292169.1	S100A1-001	594	94aa	ENSP00000292169.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1047	P23297 Q5T7Y5	NM_006271.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000368698.3	S100A1-003	784	147aa	ENSP00000357687.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T7Y5 Q5T7Y6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000368696.3	S100A1-005	522	53aa	ENSP00000357685.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T7Y4 Q5T7Y5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000436839.1	S100A1-004	236	34aa	ENSP00000389708.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T7Y5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000469893.1	S100A1-002	2619	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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