Loading…

Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: C10orf90 ENSG00000154493

.

Description

chromosome 10 open reading frame 90 [Source:HGNC Symbol;Acc:26563]

Gene Synonyms

FATS, FLJ32938, bA422P15.2

Location

Chromosome 10: 128,113,566-128,359,079 reverse strand.

GRCh37:CM000672.1

About this gene

This gene has 11 transcripts (splice variants) and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000284694.7	C10orf90-201	3076	699aa	ENSP00000284694.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31310	Q5T025 Q96M02 S4R3N7	NM_001004298.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000356858.3	C10orf90-001	2995	660aa	ENSP00000349318.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		S4R3N7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000454341.1	C10orf90-203	2785	602aa	ENSP00000398786.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96M02 S4R3N7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544758.1	C10orf90-204	2720	796aa	ENSP00000444369.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GZL2 Q5T025 S4R3N7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000432642.1	C10orf90-003	2107	662aa	ENSP00000405995.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		S4R3N7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000424927.1	C10orf90-004	1595	242aa	ENSP00000411609.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000392694.1	C10orf90-202	1414	383aa	ENSP00000376459.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T024 S4R3N7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000488181.1	C10orf90-007	1025	209aa	ENSP00000474558.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		S4R3N7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000480379.1	C10orf90-005	1012	103aa	ENSP00000474753.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96M02	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000463082.1	C10orf90-006	566	39aa	ENSP00000474615.1	Nonsense mediated decay		S4R3Q7	-	-
ENST00000368674.1	C10orf90-002	2035	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

.

Summary

.

.