Description
leucine-rich repeat kinase 1 [Source:HGNC Symbol;Acc:18608]
Gene Synonyms
FLJ23119, KIAA1790, RIPK6, Roco1
Location
Chromosome 15: 101,459,420-101,610,317 forward strand.
GRCh37:CM000677.1
About this gene
This gene has 12 transcripts (splice variants), 1 paralogue and is associated with 1 phenotype.
Transcripts
Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|---|
ENST00000388948.3 | LRRK1-003 | 7671 | 2015aa | ENSP00000373600.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS42086 | B3KSX5 E9PK39 E9PLF8 E9PMK9 Q38SD2 | NM_024652.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000284395.5 | LRRK1-201 | 7701 | 2012aa | ENSP00000284395.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B3KSX5 J3KN98 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000532029.2 | LRRK1-004 | 1241 | 264aa | ENSP00000433268.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PLF8 Q38SD2 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000534045.1 | LRRK1-007 | 569 | 32aa | ENSP00000435148.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PLF8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000525284.1 | LRRK1-001 | 6494 | 689aa | ENSP00000433069.1 | Nonsense mediated decay | E9PK39 E9PLF8 E9PMK9 | - | - | |
ENST00000531270.1 | LRRK1-002 | 6015 | 650aa | ENSP00000431668.1 | Nonsense mediated decay | E9PK39 E9PLF8 | - | - | |
ENST00000526457.2 | LRRK1-005 | 3483 | 660aa | ENSP00000436672.2 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
ENST00000532145.1 | LRRK1-006 | 2790 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000525395.2 | LRRK1-010 | 737 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000527698.1 | LRRK1-008 | 679 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000525617.2 | LRRK1-009 | 614 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000538064.1 | LRRK1-011 | 493 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |