Description
high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:5009]
Gene Synonyms
BABL, HMGI-C, HMGIC, LIPO, STQTL9
Location
Chromosome 12: 66,217,911-66,360,075 forward strand.
GRCh37:CM000674.1
About this gene
This gene has 11 transcripts (splice variants) and is associated with 62 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000403681.2 | HMGA2-001 | 4473 | 109aa | ENSP00000384026.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44936 | B2KX87 P52926 Q8IZX8 | NM_003483.4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000541363.1 | HMGA2-011 | 8094 | 99aa | ENSP00000439317.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H2U8 Q8IZX8 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000536545.1 | HMGA2-003 | 1788 | 147aa | ENSP00000437621.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H6H0 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000354636.3 | HMGA2-008 | 1529 | 106aa | ENSP00000346658.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS31854 | P52926 | NM_003484.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000425208.2 | HMGA2-006 | 1444 | 92aa | ENSP00000407306.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YFY4 P52926 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000393578.3 | HMGA2-005 | 1398 | 90aa | ENSP00000377206.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | P52926 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000393577.3 | HMGA2-013 | 611 | 118aa | ENSP00000377205.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H2A4 Q8IZX8 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000537429.1 | HMGA2-007 | 1527 | 86aa | ENSP00000443372.1 | Nonsense mediated decay | P52926 | - | - | |
| ENST00000537275.1 | HMGA2-004 | 1508 | 103aa | ENSP00000437747.1 | Nonsense mediated decay | P52926 | - | - | |
| ENST00000539662.1 | HMGA2-012 | 485 | 55aa | ENSP00000440919.1 | Nonsense mediated decay | H0YFY4 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000545998.1 | HMGA2-009 | 1584 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
