Gene: SNRNP200 ENSG00000144028

Description

small nuclear ribonucleoprotein 200kDa (U5) [Source:HGNC Symbol;Acc:30859]

Gene Synonyms

ASCC3L1, BRR2, HELIC2, KIAA0788, RP33, U5-200KD

Location

Chromosome 2: 96,940,074-96,971,297 reverse strand.

GRCh37:CM000664.1

About this gene

This gene has 9 transcripts (splice variants), 4 paralogues and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000323853.5	SNRNP200-001	7165	2136aa	ENSP00000317123.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2020	A2RRQ7 A4FU77 O75643 Q5ZF01 Q7L5W4 Q9P172	NM_014014.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000349783.5	SNRNP200-201	2673	625aa	ENSP00000326937.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JAQ9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000429650.1	SNRNP200-006	2637	595aa	ENSP00000387870.1	Nonsense mediated decay		B4E0P5	-	-
ENST00000480242.1	SNRNP200-004	3409	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000497539.1	SNRNP200-005	2666	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000480615.1	SNRNP200-003	1646	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000493271.1	SNRNP200-007	585	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000484372.1	SNRNP200-008	581	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000480835.1	SNRNP200-009	540	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

EMBL-EBI User Survey 2024

Gene: SNRNP200 ENSG00000144028

Summary

EMBL-EBI User Survey 2024

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Gene: SNRNP200 ENSG00000144028

Summary