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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SCO1 ENSG00000133028

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Description

SCO1 cytochrome c oxidase assembly protein [Source:HGNC Symbol;Acc:10603]

Gene Synonyms

SCOD1

Location

Chromosome 17: 10,583,654-10,601,692 reverse strand.

GRCh37:CM000679.1

About this gene

This gene has 5 transcripts (splice variants), 1 paralogue and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000255390.5	SCO1-001	1749	301aa	ENSP00000255390.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11158	J3QR42 K7EMB5 O75880	NM_004589.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000577427.1	SCO1-002	1601	270aa	ENSP00000463387.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QL56 J3QR42 K7EMB5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000577335.1	SCO1-006	571	91aa	ENSP00000464032.1	Nonsense mediated decay		J3QR42	-	-
ENST00000582053.1	SCO1-003	565	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000579396.1	SCO1-004	563	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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