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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SH3BP4 ENSG00000130147

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Description

SH3-domain binding protein 4 [Source:HGNC Symbol;Acc:10826]

Gene Synonyms

BOG25, EHB10, TTP

Location

Chromosome 2: 235,860,617-235,964,358 forward strand.

GRCh37:CM000664.1

About this gene

This gene has 11 transcripts (splice variants) and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000409212.1	SH3BP4-002	5231	963aa	ENSP00000386862.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2513	B4E2S1 C9JED2 C9JF25 C9JRG1 C9JWW6 Q9P0V3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392011.2	SH3BP4-001	5194	963aa	ENSP00000375867.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2513	B4E2S1 C9JED2 C9JF25 C9JRG1 C9JWW6 Q9P0V3	NM_014521.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000344528.4	SH3BP4-003	5044	963aa	ENSP00000340237.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2513	B4E2S1 C9JED2 C9JF25 C9JRG1 C9JWW6 Q9P0V3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000446904.1	SH3BP4-008	829	173aa	ENSP00000415391.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JED2 C9JF25 C9JRG1 C9JWW6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000416021.1	SH3BP4-005	593	122aa	ENSP00000403251.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JF25 C9JRG1 C9JWW6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000444916.1	SH3BP4-007	570	56aa	ENSP00000387995.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JWW6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000454947.1	SH3BP4-009	500	57aa	ENSP00000414740.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JRG1 C9JWW6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000489601.1	SH3BP4-006	638	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484097.1	SH3BP4-004	612	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493436.1	SH3BP4-010	481	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000462602.2	SH3BP4-011	257	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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