Transcript: ENST00000392011.2 SH3BP4-001

Description

SH3-domain binding protein 4 [Source:HGNC Symbol;Acc:10826]

Gene Synonyms

BOG25, EHB10, TTP

Location

Chromosome 2: 235,860,617-235,964,358 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 11 domains and features, is associated with 48030 variant alleles and maps to 524 oligo probes.

Gene

This transcript is a product of gene ENSG00000130147.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000409212.1	SH3BP4-002	5231	963aa	ENSP00000386862.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2513	B4E2S1 C9JED2 C9JF25 C9JRG1 C9JWW6 Q9P0V3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392011.2	SH3BP4-001	5194	963aa	ENSP00000375867.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2513	B4E2S1 C9JED2 C9JF25 C9JRG1 C9JWW6 Q9P0V3	NM_014521.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000344528.4	SH3BP4-003	5044	963aa	ENSP00000340237.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2513	B4E2S1 C9JED2 C9JF25 C9JRG1 C9JWW6 Q9P0V3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000446904.1	SH3BP4-008	829	173aa	ENSP00000415391.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JED2 C9JF25 C9JRG1 C9JWW6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000416021.1	SH3BP4-005	593	122aa	ENSP00000403251.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JF25 C9JRG1 C9JWW6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000444916.1	SH3BP4-007	570	56aa	ENSP00000387995.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JWW6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000454947.1	SH3BP4-009	500	57aa	ENSP00000414740.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JRG1 C9JWW6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000489601.1	SH3BP4-006	638	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484097.1	SH3BP4-004	612	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493436.1	SH3BP4-010	481	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000462602.2	SH3BP4-011	257	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 5,194 bps, Translation length: 963 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9P0V3

CCDS

This transcript is a member of the Human CCDS set: CCDS2513

Version

ENST00000392011.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000257074 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000392011.2 SH3BP4-001

Summary