Description
secreted protein, acidic, cysteine-rich (osteonectin) [Source:HGNC Symbol;Acc:11219]
Gene Synonyms
ON
Location
Chromosome 5: 151,040,657-151,066,726 reverse strand.
GRCh37:CM000667.1
About this gene
This gene has 9 transcripts (splice variants), 1 paralogue and is associated with 3 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000231061.4 | SPARC-001 | 3701 | 303aa | ENSP00000231061.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS4318 | D3DQH8 E5RJA5 E5RK62 F5GY03 F5H4E2 P09486 | NM_003118.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000521569.1 | SPARC-005 | 602 | 115aa | ENSP00000428119.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RK62 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000538026.1 | SPARC-008 | 576 | 149aa | ENSP00000440127.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RK62 F5GY03 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000539687.1 | SPARC-007 | 511 | 111aa | ENSP00000444998.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RJA5 F5H4E2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000522348.1 | SPARC-004 | 497 | 53aa | ENSP00000429152.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RJA5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000537849.1 | SPARC-009 | 218 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000520687.1 | SPARC-002 | 1598 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000521327.1 | SPARC-003 | 864 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000524277.1 | SPARC-006 | 505 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
