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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CHRAC1 ENSG00000104472

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Description

chromatin accessibility complex 1 [Source:HGNC Symbol;Acc:13544]

Gene Synonyms

CHARC1, CHARC15, CHRAC-1, CHRAC-15, CHRAC15, YCL1

Location

Chromosome 8: 141,521,397-141,527,236 forward strand.

GRCh37:CM000670.1

About this gene

This gene has 5 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000220913.5	CHRAC1-001	2488	131aa	ENSP00000220913.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6379	Q9NRG0	NM_017444.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000519533.1	CHRAC1-002	1678	56aa	ENSP00000428697.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RGS9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518971.1	CHRAC1-003	925	80aa	ENSP00000430484.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YBX4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000519618.1	CHRAC1-004	811	97aa	ENSP00000430003.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000523569.1	CHRAC1-005	618	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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