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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: THUMPD1 ENSG00000066654

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Description

THUMP domain containing 1 [Source:HGNC Symbol;Acc:23807]

Gene Synonyms

DKFZp686C1054, FLJ20274

Location

Chromosome 16: 20,744,986-20,753,406 reverse strand.

GRCh37:CM000678.1

About this gene

This gene has 6 transcripts (splice variants) and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000381337.2	THUMPD1-001	4122	353aa	ENSP00000370741.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10588	B4DFY9 O60362 Q9NXG2	NM_017736.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000431224.2	THUMPD1-201	4117	439aa	ENSP00000392282.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DFY9 J3KQB0 O60362	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396083.2	THUMPD1-002	2624	353aa	ENSP00000379392.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10588	B4DFY9 O60362 Q9NXG2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000565248.1	THUMPD1-005	1099	145aa	ENSP00000455033.1	Nonsense mediated decay		H3BNW0	-	-
ENST00000570231.1	THUMPD1-003	1040	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000569768.1	THUMPD1-004	635	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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