Gene: SNRNP40 ENSG00000060688

Description

small nuclear ribonucleoprotein 40kDa (U5) [Source:HGNC Symbol;Acc:30857]

Gene Synonyms

40K, HPRP8BP, PRP8BP, PRPF8BP, RP11-490K7.3, SFP38, SPF38, WDR57

Location

Chromosome 1: 31,732,417-31,769,662 reverse strand.

GRCh37:CM000663.1

About this gene

This gene has 8 transcripts (splice variants) and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263694.4	SNRNP40-001	1595	357aa	ENSP00000263694.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS340	A0MNP2 Q96DI7	NM_004814.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000446633.2	SNRNP40-201	1483	409aa	ENSP00000406841.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DQJ1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373720.3	SNRNP40-002	1087	127aa	ENSP00000362825.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9NSS8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000489853.1	SNRNP40-003	1928	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486941.1	SNRNP40-005	743	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463988.1	SNRNP40-007	677	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474025.1	SNRNP40-006	581	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491106.1	SNRNP40-004	459	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

EMBL-EBI User Survey 2024

Gene: SNRNP40 ENSG00000060688

Summary

EMBL-EBI User Survey 2024

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Gene: SNRNP40 ENSG00000060688

Summary