Transcript: ENST00000491106.1 SNRNP40-004

Description

small nuclear ribonucleoprotein 40kDa (U5) [Source:HGNC Symbol;Acc:30857]

Gene Synonyms

40K, HPRP8BP, PRP8BP, PRPF8BP, RP11-490K7.3, SFP38, SPF38, WDR57

Location

Chromosome 1: 31,732,633-31,733,924 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 666 variant alleles and maps to 190 oligo probes.

Gene

This transcript is a product of gene ENSG00000060688.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263694.4	SNRNP40-001	1595	357aa	ENSP00000263694.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS340	A0MNP2 Q96DI7	NM_004814.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000446633.2	SNRNP40-201	1483	409aa	ENSP00000406841.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DQJ1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373720.3	SNRNP40-002	1087	127aa	ENSP00000362825.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9NSS8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000489853.1	SNRNP40-003	1928	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486941.1	SNRNP40-005	743	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463988.1	SNRNP40-007	677	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474025.1	SNRNP40-006	581	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491106.1	SNRNP40-004	459	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 459 bps,

Version

ENST00000491106.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000010660 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000491106.1 SNRNP40-004

Summary